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Journal of Clinical Microbiology, June 1998, p. 1688-1692, Vol. 36, No. 6
Instituto de Biotecnología,
Received 10 November 1997/Returned for modification 2 February
1998/Accepted 11 March 1998
In the present investigation we characterized the antigenic
diversity of the VP4 and VP7 proteins in 309 and 261 human rotavirus strains isolated during two consecutive epidemic seasons, respectively, in three different regions of Mexico. G3 was found to be the prevalent VP7 serotype during the first year, being superseded by serotype G1
strains during the second season. To antigenically characterize the VP4
protein of the strains isolated, we used five neutralizing monoclonal
antibodies (MAbs) which showed specificity for VP4 serotypes P1A, P1B,
and P2 in earlier studies. Eight different patterns of reactivity with
these MAbs were found, and the prevalence of three of these patterns
varied from one season to the next. The P genotype of a subset of 52 samples was determined by PCR. Among the strains characterized as
genotype P[4] and P[8] there were three and five different VP4 MAb
reactivity patterns, respectively, indicating that the diversity of
neutralization epitopes in VP4 is greater than that previously
appreciated by the genomic typing methods.
Group A rotaviruses are a leading
cause of severe diarrhea in the young of humans and animals
(16). Both of the rotavirus surface proteins, VP4 and VP7,
are able to induce neutralizing antibodies; hence, the serotypic
specificity of these viruses is dual and is termed G and P for VP7 and
VP4, respectively (4, 11, 14). Rotavirus serotypes were
originally defined on the basis of neutralization assays with
hyperimmune sera, and later it was shown that such specificity depends
mostly on VP7 (G serotypes) (4, 11). More recently, P
serotypes have been defined by neutralization assays with sera
hyperimmune to baculovirus-expressed VP4 proteins or to reassortant
viruses (4, 8, 11). At least 10 G serotypes (G1 to G6, G8 to
G10, and G12) and seven P serotypes (P1A, P1B, P2A, P3, P4, P5, and P8)
have been found among human rotaviruses (HRVs) (4, 7, 12).
By sequencing the VP4-coding gene, eight genomic P types (genotypes)
have been defined among HRVs, and these genotypes have been further
shown to correspond to some of the described P serotypes. In addition
to nucleotide sequencing, dot blot hybridization- and PCR-based assays
have also been used to determine the VP4 genotypes (6, 17).
The availability of neutralizing monoclonal antibodies
(NtMAbs) specific for different VP7 serotypes has
allowed extensive epidemiological studies to be carried out, and
these studies have identified serotypes G1 to G4 as being the
epidemiologically relevant serotypes worldwide. On the other hand,
knowledge about the diversity of P serotypes among circulating HRV
strains is scarce, due to the lack of readily available VP4-typing
polyclonal sera, as well as the lack of monoclonal antibodies (MAbs)
specific for different VP4 serotypes; therefore, P-genotyping methods
have been used as a surrogate for serotyping.
In the several genotyping studies conducted worldwide, genotypes P[4]
(associated with a VP7 protein with G2 specificity) and P[8]
(associated with the G1, G3, or G4 VP7 protein) have emerged as the
most frequent genotypes, altogether representing about 95% of the
typeable strains (7). In those studies, the single strain
most frequently found was serotype P[8], G1, followed by P[8], G4;
P[4], G2; and P[8], G3 (7). These surveys are providing
relevant information about the prevalence of rotavirus P genotypes;
however, the nonserological typing methods used do not necessarily
reflect the antigenic diversity of the protein. In fact, exceptions to
the correlation between P genotypes and the serologically defined P
serotypes have been reported (10, 11, 15, 21), indicating
the need for antigenic characterization, in addition to genomic
typing, of the VP4 proteins of circulating HRV strains.
Recently, neutralizing anti-VP4 MAbs directed to HRV strains having
serotype P1A, P1B, and P2A specificities have been produced and
evaluated as serotype-specific reagents (3, 22). In this study, using these MAbs we have characterized the antigenic diversity and variability of the VP4 protein associated with HRV strains circulating during two epidemic seasons in three different geographic regions of Mexico. We found that the antigenic diversity of VP4 is
greater than that suggested by the genomic typing methods and that the
prevalent antigenic VP4 type may vary from one epidemic season to the
next.
Stool specimens.
A total of 1,091 and 605 stool specimens
from infants with acute diarrhea were collected during two consecutive
rotavirus epidemic seasons, October 1994 to March 1995 and October 1995 to March 1996, respectively. The infants included in the first year of
the study had been admitted for acute diarrhea to hospitals or
outpatient clinics in three geographic regions of Mexico: the central
region (Oral Rehydration Unit, Hospital Infantil de México, and
Iztapalapa Outpatient Clinics 15 and 31, Instituto Mexicano del Seguro
Social [IMSS] in Mexico City; Outpatient Clinic of Ministry of
Health, in Tlaxcala, Tlaxcala; and Hospital of the University of San
Luis Potosí in San Luis Potosí, San Luis
Potosí), the northeastern region [Hospitals 4, 6, and 17, IMSS, in Monterrey, Nuevo León), and the southeastern region
(Oral Rehydration Unit, O'Horán Hospital, and Clinics 12, 17, and 59 and "El Fénix," IMSS, in Mérida, Yucatán).
The same clinics participated in the second year of the study, with the
exception of the clinics in the central region of Mexico, where fecal
samples were collected only from patients in the Hospital Infantil de
México and the Hospital of the University of San Luis
Potosí.
Rotavirus screening.
Fecal specimens were initially screened
for rotavirus either by a rapid (15-min) enzyme-linked immunosorbent
assay (ELISA; Meridian Laboratories) or by silver staining of viral
double-stranded RNA segments separated by gel electrophoresis
(9) and were later confirmed to be positive by an ELISA
(Dako Co.) known to be sensitive and specific for rotavirus detection
(5). Of the 1,091 stool specimens obtained during the first
season, 593 (54%) were positive for rotavirus, while in the second
season 323 of 605 (53%) were positive. Of all these samples, 309 from
the first year and 261 from the second year were characterized in this
study. The samples were chosen so that similar numbers of samples from each of the three geographic regions were studied.
Rotavirus VP4-typing nomenclature.
The nomenclature
described in a review by Estes (4) is followed in this
report. Rotavirus VP4 has been classified on the basis of both genomic
(genotype) and antigenic (serotype) characteristics. Since the
correlation between VP4 (P) serotypes and genotypes is not completely
established, both classification criteria are used to describe
rotaviruses. P genotypes are included within brackets, while P
genotypes with open numbers are restricted to serotypes. Thus, the full
description of human rotavirus Wa strain would be P1A[8], G1.
Rotaviruses for which only the P genotype [in addition to the VP7 (G)
serotype] has been determined would be described, for instance, as
P[8], G3 or P[4], G2.
MAbs.
Five serotype-specific VP7 MAbs were used: serotype
G1, MAbs KU-4 (27) and 5E8 (22); serotype G2, MAb
1C10 (22); serotype G3, MAb 159 (25, 26); and
serotype G4, MAb ST-2G7 (27). In addition, the
cross-reactive VP7 MAb 129 (25, 26) was also used. To
characterize the VP4 protein, five MAbs were used: F45:4 (hereafter
referred to as F45), derived from the serotype P1A strain F45
(3); 1A10, derived from the serotype P1A strain Wa
(23); RV5:2 (hereafter referred to as RV5), derived from the
serotype P1B strain RV5 (3); and HS6, derived from the serotype P2 strain ST3 (23). These VP4 MAbs had previously
been shown to be specific for HRV strains having the same serotype as
that of the immunizing virus, P1A, P1B, or P2, when assayed by ELISA
(3, 23).
VP7-serotyping ELISA.
The G-serotyping ELISA was carried out
as described previously (22). A virus was assigned to a
specific serotype when the optical density at 410 nm
(OD410) with the MAb corresponding to that serotype was
higher than 0.2 and at least twice as high as the value corresponding
to any other serotype.
VP4-typing ELISA.
The VP4-typing ELISA was performed
as described previously (23). MAbs were used to capture
viral antigen, and bound antigen was detected with an equivolumetric
mix of rabbit antisera hyperimmune to Wa, DS1XRRV, RRV, and ST3
rotaviruses. A MAb was considered to react with a virus when the
OD410 value for that MAb was at least 0.4. A second and/or
a third MAb was also considered to interact with the same virus strain
when it reacted with an OD410 value higher than 0.2 and was
also higher than one-half of the value for the MAb with maximum
reactivity. An OD410 of 0.4 was chosen as the cutoff value
for the MAb with the highest reactivity in order to be able to include
low-level reactivity with multiple MAbs.
Identification of P genotypes by reverse transcription-PCR.
The identification of genomic types P[4], P[6], P[8], and P[9]
was done as described by Gentsch et al. (6).
Statistical analysis.
Comparisons of the proportions of HRV
G serotypes and the VP4 MAb patterns of reactivity were performed by
the chi-square test or Fisher's exact test.
Temporal and geographic distributions of HRV G serotypes.
Three hundred nine and 261 rotavirus-positive specimens collected in
three geographic regions of Mexico during epidemic seasons of
1994-1995 and 1995-1996, respectively, were characterized (Table 1). In the 1994-1995 season, G3 was
the prevalent serotype in the central region of Mexico, while in
the other two regions, G1 and G3 viruses were frequently detected
(P < 0.0001). In the second epidemic season, serotype
G1 HRVs were predominant in all geographic regions studied.
0095-1137/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Antigenic and Genomic Diversity of Human Rotavirus VP4 in Two
Consecutive Epidemic Seasons in Mexico

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ABSTRACT
Top
Abstract
Introduction
Materials & Methods
Results
Discussion
References
![]()
INTRODUCTION
Top
Abstract
Introduction
Materials & Methods
Results
Discussion
References
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials & Methods
Results
Discussion
References
![]()
RESULTS
Top
Abstract
Introduction
Materials & Methods
Results
Discussion
References
TABLE 1.
Distribution of human rotavirus G serotypes during
two epidemic seasons, 1994-1995 and 1995-1996, in three
geographic regions of Mexico
Diversity and variation of HRV VP4 antigenic types. To test if the VP4 protein varied from one epidemic season to the next, as was found with VP7, we antigenically characterized the viruses with NtMAbs that have been proposed to be VP4 serotype specific (3, 23). We used MAbs 1A10 and F45, proposed to recognize P1A strains; MAb RV5, proposed to recognize P1B viruses; and MAb HS6, suggested to interact with serotype P2A rotaviruses.
Overall, eight different VP4 MAb patterns of reactivity were detected among the HRVs characterized; for simplicity these patterns were named A to H (Table 2). With the exception of one serotype G3 HRV specimen that reacted with MAb HS6 (pattern H), the serotype G1 and G3 HRV strains collectively had five patterns of reactivity with the VP4 MAbs (patterns A to E). Considering both epidemic seasons combined, VP4 pattern A was by far the most frequently occurring pattern among the G3 strains, while patterns A and B seemed to be equally distributed among serotype G1 viruses (P < 0.0001), with the other patterns being represented less frequently. Among the serotype G2 specimens, three VP4 patterns were detected (patterns C, F, and G), with patterns F and G representing all but one of the characterized G2 strains. VP4 pattern C was the only one shared by serotype G1 to G4 viruses.
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Diversity of the VP4 gene and correlation with the VP4 MAb reactivity. To understand the apparent paradox of the existence of HRV-containing specimens that were reactive with MAbs raised against rotaviruses of different P-serotype specificities, we investigated the correlation between the VP4 genomic type and the reactivity with VP4 MAbs. A representative sample of 52 specimens that included all the different NtMAb patterns of reactivity detected was genotyped by PCR. All HRV strains having patterns of reactivity A, B, D, and E were found to be genomic type P[8] (Table 3). Like the specimens that were recognized only by MAb RV5 (pattern G), the strains having pattern F were all genomic type P[4]. The strains with pattern C could be either genotype P[4] (one G2 strain) or genotype P[8] (two G3 strains). The single strain reacting with MAb HS6 (pattern H) was, as expected, genomic type P[6]. No strain was genomic type P[9]. These results indicate that the epitopes recognized by MAbs 1A10 and RV5 can be present in both P[4] (presumably P1B) and P[8] (presumably P1A) strains. Of relevance, among the strains characterized as P[4] and P[8], there were three and five different VP4-MAb patterns of reactivity, respectively (Table 3), indicating that the diversity of neutralization epitopes in VP4 is greater than that previously appreciated by the genomic typing methods.
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Prevalence of rotavirus genomic P types. The correlation between the VP4 MAb patterns of reactivity and the genomic P types, along with the observation that among specimens having a VP4 pattern C the serotype G2 viruses are genotype P[4] while other G serotypes are type P[8], allowed us to infer the prevalence of the different genomic P types in the epidemic seasons studied. Three hundred fifteen strains whose G serotype could be determined and which were reactive with at least one VP4 MAb were used to make this inference. Genomic type P[8] was the most prevalent in all three geographic regions, totaling from 62.5 to 100% of the specimens for different regions and epidemic seasons, while genomic type P[6] was the least prevalent (less than 1%). The prevalence of genomic type P[4] was highly variable; it was absent from the northeastern region in both epidemic seasons, while in the central and southeastern regions its prevalence increased from 0 to 6.5% and from 10.3 to 37.5%, respectively, in the consecutive seasons analyzed.
The results of this study are in agreement with the findings from previous surveys carried out in several countries, including Japan, Brazil, the United States, and South Africa, where it was found that P[8] is the genomic type with the highest prevalence, followed by P[4] as the second most prevalent virus and with other types, like P[3], P[6], and P[9], being detected less frequently (7). However, important deviations from this general pattern have recently been described. In a study carried out in India, it was found that genotype P[6] strains with G1, G2, G3, G4, and G9 specificities represented 43% of the typeable strains, with P[6], G9 being the most prevalent virus (24).| |
DISCUSSION |
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In this investigation we have characterized the antigenic variability of the VP4 protein from HRV strains isolated during two epidemic seasons in different regions of Mexico. This variability was correlated with the VP7 serotypes and the VP4 genotypes of the viruses studied.
As has been previously observed in Mexico (2, 22, 28) and has also been documented in many other studies around the world (1, 7, 16), we observed a change in the prevalent G rotavirus serotype from one season to the next. Serotype G3 viruses were the most prevalent during the first epidemic season, while during the second season they were superseded by serotype G1 strains. Also, the relative predominance of either of these two G serotypes during a single epidemic season was different among the geographic regions analyzed.
Since VP4 is an important inductor of neutralizing antibodies in natural infections of children (20, 29) and it segregates independently of VP7 (13), we investigated if, like VP7, it changes over time. To characterize the antigenic changes in the VP4 protein we used VP4 NtMAbs that had previously been described as P serotype specific (3, 23). The use of these MAbs allowed the recognition of eight different patterns of reactivity among the specimens studied, and the relative frequency of three of these VP4 patterns (all associated with G3 VP7 proteins) was found to change from one season to the next. It is, however, difficult to draw conclusions from the observed VP4 variability, since the reactivities of the viruses with the VP4 NtMAbs were not all-or-nothing events (see below), and, in addition, the number of G3 viruses collected during the first year was small compared with the number analyzed in the second year (11 versus 176). More studies are needed to confirm if the observed variability in VP4 indeed occurs and to determine if the putative changes of VP4 over time are independent of the associated VP7 protein or are just the consequence of the variability in the VP7 protein. Also, the significance of the potential variation in VP4 for the induction of protective immunity should be investigated.
In this study, the interaction of an HRV strain with more than one VP4 MAb was scored as positive when the second or third MAb recognized the virus with at least one-half the reactivity obtained with the MAb with the highest reactivity. The same twofold difference criterion has been used to determine the G-serotype specificity with VP7 MAbs (22). By changing this criterion, considering as significant reactivities that were at least one-fourth or one-eighth the value of the MAb with the highest reactivity, we found that the virus strains reacted with a wider spectrum of MAbs (data not shown), indicating that there is a difference in the degree rather than in the absolute reactivity of the P[8] and P[4] specimens with the MAbs tested. The high cross-reactivity observed with these VP4 MAbs is consistent with the known level of serologic cross-reactivity of VP4, even for the most serotypically diverse regions of the molecule (8, 18, 19).
The reactivities of the VP4 MAbs in our particular format were found not to be entirely restricted to a given VP4 genomic type. MAb 1A10 was found to react with 80% of P[8] strains and 50% of P[4] strains, while RV5 reacted with 20% of P[8] strains and 83% of P[4] strains. In a previous study, analysis of a limited number of rotavirus-positive stool samples showed that when hyperimmune sera matched to the VP7 serotype of the strains being characterized were used as capture antibodies, MAbs F45, ST3:3, and RV5 specifically recognized strains with inferred genotypes P[8], P[6], and P[4], respectively. However, when a mixture of hyperimmune sera to different G serotypes was used as the capture antibody in that study, a large proportion of the samples was found to cross-react with more than one MAb (3). Thus, the degree of the serotype cross-reactivity of the VP4 MAbs seems to depend on the specificity of the hyperimmune antiserum used in the assay for capture or detection of virus antigen.
The multiplicities of the VP4 MAb patterns of reactivity observed within P[8] and P[4] strains suggests that the diversity of neutralization epitopes on VP4 is greater than that suggested by genomic typing methods. These observations, together with the inconsistencies found between VP4 genotyping and VP4 serotyping, indicate that to fully understand the antigenic diversity and variability of VP4 and its relevance for the induction of protection, both serotyping and genotyping of HRVs should be carried out. In this regard, the MAbs used in this investigation appear to be useful for the antigenic characterization of the viruses, although their use as serotyping reagents still requires further investigation.
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ACKNOWLEDGMENTS |
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This work was partially supported by grants 75197-527106 from the Howard Hughes Medical Institute, 3270-N9308 from the National Council for Science and Technology-Mexico, GPV/V27/181/54 from the WHO Global Programme for Vaccines, and 940315 from the National Health and Medical Research Council of Australia (to B.S.C.) and by a grant from the Fundación Mexicana para la Salud.
We thank the following persons for their contributions in the collection and rotavirus screening of samples: Gerardo G. Polanco, Mussaret Saidi, Adolfo Palma, Manuel Baeza, Marylin Puerto, María del Refugio González, Alfonso Peniche, Luis Cervera, Joaquín Cuevas, and Raúl Sales.
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FOOTNOTES |
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* Corresponding author. Mailing address: Instituto de Biotecnología/UNAM, A.P. 510-3, Colonia Miraval, Cuernavaca, Morelos 62250, México. Phone: (52-73) 29-1661. Fax: (52-73) 17-2388. E-mail: arias{at}ibt.unam.mx.
Present address: Departamento de Biología Molecular,
Instituto de Investigaciones Biomédicas, Universidad Nacional
Autónoma de México, Apdo. Postal 70-228, Mexico City 04510, Mexico.
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